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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UVM rs4453827 chr3:53750084 T/C 1.25E-8 66 27.9 27.63 12.33 KM Plot
UVM rs4457966 chr15:40924112 T/G 1.26E-5 67 27.87 24.87 17.07 KM Plot
UVM rs4622700 chr2:201793113 C/T 2.98E-7 67 24.77 27.9 1.27 KM Plot
UVM rs4663844 chr2:239023720 G/A 4.67E-5 67 27.37 24.6 1.18 KM Plot
UVM rs4779500 chr15:29419891 C/T 8.47E-5 66 25.32 41.87 7.6 KM Plot
UVM rs4906656 chr15:26332501 G/T 9.28E-14 65 26.5 28.93 0.15 KM Plot
UVM rs5022768 chr2:201963576 G/A 3.74E-7 66 24.62 27.9 1.27 KM Plot
UVM rs535902 chr6:74191545 C/T 0.000706 67 2.07 25.12 27.37 KM Plot
UVM rs55638494 chr12:9565753 A/G 0.000174 65 27.62 22.98 7.6 KM Plot
UVM rs55665529 chr12:9572754 C/T 0.000174 65 27.62 22.98 7.6 KM Plot
UVM rs55665673 chr12:9566540 G/A 0.000174 65 27.62 22.98 7.6 KM Plot
UVM rs55697855 chr12:9604892 A/T 0.000174 65 27.62 22.98 7.6 KM Plot
UVM rs55788133 chr15:40664239 G/A 5.12E-7 66 26.55 24.87 1.27 KM Plot
UVM rs55873283 chr12:9813716 C/A 0.000125 67 27.88 21.8 7.6 KM Plot
UVM rs55954396 chr15:40870299 T/C 0.000227 67 27.87 26.12 16.78 KM Plot